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Reproducibility

 

Four simple recommendations to encourage best practices in research software

Scientific research relies on computer software, yet software is not always developed following practices that ensure its quality and sustainability. This manuscript does not aim to propose new software development best practices, but rather to …

From policy to practice: Lessons learned from an open science funding initiative

In the past few years, there has been a notable shift in the open science landscape as more countries and international agencies release recommendations and implementation guidelines for open scholarship. In August 2022, the US White House Office of …

GelBox: Open-source software to improve rigor and reproducibility when analyzing gels and immunoblots

GelBox is open-source software that was developed with the goal of enhancing rigor, reproducibility, and transparency when analyzing gels and immunoblots. It combines image adjustments (cropping, rotation, brightness, and contrast), background …

General Principles of Preclinical Study Design

Preclinical studies using animals to study the potential of a therapeutic drug or strategy are important steps before translation to clinical trials. However, evidence has shown that poor quality in the design and conduct of these studies has not …

Genomics Workshop Overview

Workshop overview for the Data Carpentry genomics curriculum. Data Carpentry’s aim is to teach researchers basic concepts, skills, and tools for working with data so that they can get more done in less time, and with less pain. This workshop teaches …

Geospatial Workshop Overview

Data Carpentry’s aim is to teach researchers basic concepts, skills, and tools for working with data so that they can get more done in less time, and with less pain. Interested in teaching these materials? We have an onboarding video available to …

Getting Involved with TOP Factor

This webinar provides an overview of TOP Factor: its rationale, how it is being used, and how each of the TOP standards relate to individual scores. We also cover how to get involved with TOP Factor by inviting interested community members to suggest …

Good enough practices in scientific computing

Computers are now essential in all branches of science, but most researchers are never taught the equivalent of basic lab skills for research computing. As a result, data can get lost, analyses can take much longer than necessary, and researchers are …

Growth from uncertainty: understanding the replication 'crisis' in infant psychology

Psychology is a discipline that has a high number of failed replications, which has been characterised as a ‘crisis’ on the assumption that failed replications are indicative of untrustworthy research. This paper uses Chang’s concept of epistemic …

Harry Potter and the Methods of Reproducibility

"Harry Potter and the Methods of Reproducibility -- A brief Introduction to Open Science" gives a brief overview of Open Science, particularly reproducibility, for newcomers to the topic. It introduces the concept of questionable research practices …

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