Reproducibility

Programming with R

The best way to learn how to program is to do something useful, so this introduction to R is built around a common scientific task: data analysis. Our real goal isn’t to teach you R, but to teach you the basic concepts that all programming depends …

Project Organization and Management for Genomics

Data Carpentry Genomics workshop lesson to learn how to structure your metadata, organize and document your genomics data and bioinformatics workflow, and access data on the NCBI sequence read archive (SRA) database. Good data organization is the …

PsyTeachR

Materials for the University of Glasgow Institute of Neuroscience and Psychology’s undergraduate and MSc methods courses + Experiences, insights, and materials for teaching R across all undergraduate and postgraduate levels.

Public Availability of Published Research Data in High-Impact Journals

Background There is increasing interest to make primary data from published research publicly available. We aimed to assess the current status of making research data available in highly-cited journals across the scientific literature. Methods and …

Public Data Archiving in Ecology and Evolution: How Well Are We Doing?

Policies that mandate public data archiving (PDA) successfully increase accessibility to data underlying scientific publications. However, is the data quality sufficient to allow reuse and reanalysis? We surveyed 100 datasets associated with …

Python for Humanities

Python is a general purpose programming language that is useful for writing scripts to work effectively and reproducibly with data. This is an introduction to Python designed for participants with no programming experience. These lessons can be …

Questionable research practices among Italian research psychologists

A survey in the United States revealed that an alarmingly large percentage of university psychologists admitted having used questionable research practices that can contaminate the research literature with false positive and biased findings. We …

R for Reproducible Scientific Analysis

This lesson in part of Software Carpentry workshop and teach novice programmers to write modular code and best practices for using R for data analysis. an introduction to R for non-programmers using gapminder data The goal of this lesson is to teach …

R for Social Scientists

Data Carpentry lesson part of the Social Sciences curriculum. This lesson teaches how to analyse and visualise data used by social scientists. Data Carpentry’s aim is to teach researchers basic concepts, skills, and tools for working with data so …

R para Análisis Científicos Reproducibles

Una introducción a R utilizando los datos de Gapminder. El objetivo de esta lección es enseñar a las programadoras principiantes a escribir códigos modulares y adoptar buenas prácticas en el uso de R para el análisis de datos. R nos provee un …